Detailed information of OS493_027443-T1 in Lophelia pertusa

Genomic Location: scaffold_149:836232...858709
NR annotation: KAJ7356045.1, glycerol-3-phosphate O-acyltransferase 2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9LDV4Alanine aminotransferase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALAAT2 PE=1 SV=1
Q54MJ7Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=gpt PE=3 SV=1
P52894Alanine aminotransferase 2 OS=Hordeum vulgare OX=4513 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000909 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_027443-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR045088
all species →		FamilyAminotransferase ALAT1/2-likeInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11751
all species →		ALANINE AMINOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004021
all species →		Molecular FunctionL-alanine:2-oxoglutarate aminotransferase activityInterproscan
GO:0008483
all species →		Molecular Functiontransaminase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_027443-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_027443-T1 global co-expression network
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