Detailed information of OS493_027757-T1 in Lophelia pertusa

Genomic Location: scaffold_153:752454...763713
NR annotation: KAJ7377678.1, YY1-associated factor 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IY57YY1-associated factor 2 OS=Homo sapiens OX=9606 GN=YAF2 PE=1 SV=3
Q99LW6YY1-associated factor 2 OS=Mus musculus OX=10090 GN=Yaf2 PE=1 SV=1
Q8N488RING1 and YY1-binding protein OS=Homo sapiens OX=9606 GN=RYBP PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006392 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00641
all species →		zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039958
all species →		FamilyRING1 and YY1-binding protein/YY1-associated factor 2Interproscan
IPR001876
all species →		DomainZinc finger, RanBP2-typeInterproscan
IPR036443
all species →		Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12920
all species →		RYBP AND YAF2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0045893
all species →		Biological Processpositive regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_027757-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_027757-T1 global co-expression network
TOP