Detailed information of OS493_028032-T1 in Lophelia pertusa

Genomic Location: scaffold_157:304535...314722
NR annotation: KAJ7389978.1, Lrrfip2p [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B2GUE2Leucine-rich repeat flightless-interacting protein 2 OS=Xenopus tropicalis OX=8364 GN=lrrfip2 PE=2 SV=1
Q91WK0Leucine-rich repeat flightless-interacting protein 2 OS=Mus musculus OX=10090 GN=Lrrfip2 PE=1 SV=1
Q2T9W6Leucine-rich repeat flightless-interacting protein 2 OS=Bos taurus OX=9913 GN=LRRFIP2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004819 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09738
all species →		LRRFIPLRRFIP familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019139
all species →		FamilyLeucine-rich repeat flightless-interacting protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19212
all species →		LEUCINE RICH REPEAT IN FLII INTERACTING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_028032-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_028032-T1 global co-expression network
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