Detailed information of OS493_028268-T1 in Lophelia pertusa

Genomic Location: scaffold_161:351045...368155
NR annotation: KAJ7355053.1, hypothetical protein OS493_028268 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P96738PGA biosynthesis protein CapA OS=Bacillus subtilis (strain 168) OX=224308 GN=capA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000705 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09587
all species →		PGA_capBacterial capsule synthesis protein PGA_capDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052169
all species →		FamilyCell Wall Biosynthesis Accessory ProteinInterproscan
IPR019079
all species →		DomainCapsule synthesis protein, CapAInterproscan
IPR029052
all species →		Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33393
all species →		POLYGLUTAMINE SYNTHESIS ACCESSORY PROTEIN RV0574C-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_028268-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_028268-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_028268-T1 global co-expression network
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