Detailed information of OS493_028477-T1 in Lophelia pertusa

Genomic Location: scaffold_164:773191...777653
NR annotation: KAJ7383393.1, Mesoderm induction early response protein 3 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZKT9Mesoderm induction early response protein 1 OS=Gallus gallus OX=9031 GN=MIER1 PE=2 SV=1
Q3UHF3Mesoderm induction early response protein 3 OS=Mus musculus OX=10090 GN=Mier3 PE=1 SV=2
Q8N108Mesoderm induction early response protein 1 OS=Homo sapiens OX=9606 GN=MIER1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006880 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01448
all species →		ELM2ELM2 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000949
all species →		DomainELM2 domainInterproscan
IPR040138
all species →		FamilyMesoderm induction early response protein/metastasis-associated proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10865
all species →		METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003714
all species →		Molecular Functiontranscription corepressor activityInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0016575
all species →		Biological Processobsolete histone deacetylationInterproscan
GO:0042826
all species →		Molecular Functionhistone deacetylase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_028477-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_028477-T1 global co-expression network
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