Detailed information of OS493_028682-T1 in Lophelia pertusa

Genomic Location: scaffold_167:595491...598325
NR annotation: KAJ7355015.1, hypothetical protein OS493_028682 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P9WMV8Cholesterol oxidase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=choD PE=3 SV=1
P9WMV9Cholesterol oxidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=choD PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001043 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00890
all species →		FAD_binding_2FAD binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036188
all species →		Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR003953
all species →		DomainFAD-dependent oxidoreductase 2, FAD binding domainInterproscan
IPR052542
all species →		FamilyCholesterol Oxidase EnzymeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47470
all species →		CHOLESTEROL OXIDASEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_028682-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_028682-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_028682-T1 global co-expression network
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