Detailed information of OS493_028702-T1 in Lophelia pertusa

Genomic Location: scaffold_168:548...6602
NR annotation: KAJ7325980.1, hypothetical protein OS493_028702, partial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9WVF7DNA polymerase epsilon catalytic subunit A OS=Mus musculus OX=10090 GN=Pole PE=1 SV=3
Q07864DNA polymerase epsilon catalytic subunit A OS=Homo sapiens OX=9606 GN=POLE PE=1 SV=5
Q9VCN1DNA polymerase epsilon catalytic subunit 1 OS=Drosophila melanogaster OX=7227 GN=PolE1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002978 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08490
all species →		DUF1744Domain of unknown function (DUF1744)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029703
all species →		FamilyDNA polymerase epsilon catalytic subunitInterproscan
IPR013697
all species →		DomainDNA polymerase epsilon, catalytic subunit A, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10670
all species →		DNA POLYMERASE EPSILON CATALYTIC SUBUNIT AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000278
all species →		Biological Processmitotic cell cycleInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003887
all species →		Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0006272
all species →		Biological Processleading strand elongationInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006287
all species →		Biological Processbase-excision repair, gap-fillingInterproscan
GO:0006297
all species →		Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0008310
all species →		Molecular Functionsingle-stranded DNA 3'-5' DNA exonuclease activityInterproscan
GO:0008622
all species →		Cellular Componentepsilon DNA polymerase complexInterproscan
GO:0045004
all species →		Biological ProcessDNA replication proofreadingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_028702-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_028702-T1 global co-expression network
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