Detailed information of OS493_028778-T1 in Lophelia pertusa

Genomic Location: scaffold_169:108109...112491
NR annotation: KAJ7389810.1, Methyltransferase-like protein 6 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8TCB7tRNA N(3)-cytidine methyltransferase METTL6 OS=Homo sapiens OX=9606 GN=METTL6 PE=1 SV=2
Q5RDV8tRNA N(3)-cytidine methyltransferase METTL6 OS=Pongo abelii OX=9601 GN=METTL6 PE=2 SV=1
Q8BVH9tRNA N(3)-cytidine methyltransferase METTL6 OS=Mus musculus OX=10090 GN=Mettl6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001564 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08242
all species →		Methyltransf_12Methyltransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR013217
all species →		DomainMethyltransferase type 12Interproscan
IPR026113
all species →		FamilytRNA N(3)-methylcytidine methyltransferase METTL2/6/8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22809
all species →		METHYLTRANSFERASE-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_028778-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_028778-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_028778-T1 global co-expression network
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