Detailed information of OS493_028818-T1 in Lophelia pertusa

Genomic Location: scaffold_169:506371...515264
NR annotation: KAJ7389849.1, Dynactin subunit 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A5G2QD80Dynactin subunit 2 OS=Sus scrofa OX=9823 GN=DCTN2 PE=1 SV=1
Q99KJ8Dynactin subunit 2 OS=Mus musculus OX=10090 GN=Dctn2 PE=1 SV=3
Q6AYH5Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007254 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04912
all species →		DynamitinDynamitin FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028133
all species →		FamilyDynamitinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15346
all species →		DYNACTIN SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005813
all species →		Cellular ComponentcentrosomeInterproscan
GO:0005869
all species →		Cellular Componentdynactin complexInterproscan
GO:0007017
all species →		Biological Processmicrotubule-based processInterproscan
GO:0007052
all species →		Biological Processmitotic spindle organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10424DCTN2; dynactin 2-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_028818-T1 global co-expression network
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