Gene detail

Detailed information of OS493_029439-T1 in Lophelia pertusa

Genomic Location: scaffold_179:274966...283873
NR annotation: KAJ7354882.1, Conserved oligomeric Golgi complex subunit [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8C0L8	Conserved oligomeric Golgi complex subunit 5 OS=Mus musculus OX=10090 GN=Cog5 PE=1 SV=3
Q9UP83	Conserved oligomeric Golgi complex subunit 5 OS=Homo sapiens OX=9606 GN=COG5 PE=1 SV=4
Q9C9V9	Conserved oligomeric Golgi complex subunit 5 OS=Arabidopsis thaliana OX=3702 GN=COG5 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002749 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10392 all species →	COG5_N	Conserved oligomeric Golgi complex subunit 5, N-terminal	Repeat	Interproscan
PF20649 all species →	COG5_C	Conserved oligomeric Golgi complex subunit 5, C-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049176 all species →	Domain	Conserved oligomeric Golgi complex subunit 5, N-terminal	Interproscan
IPR048485 all species →	Domain	Conserved oligomeric Golgi complex subunit 5, helical domain	Interproscan
IPR019465 all species →	Family	Conserved oligomeric Golgi complex subunit 5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13228 all species →	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006891 all species →	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0017119 all species →	Cellular Component	Golgi transport complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_029439-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_029439-T1 global co-expression network