Detailed information of OS493_029679-T1 in Lophelia pertusa

Genomic Location: scaffold_183:6511...8251
NR annotation: KAJ7377322.1, hypothetical protein OS493_029679, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008016 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05881
all species →		CNPase2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008431
all species →		FamilyCyclic nucleotide phosphodiesteraseInterproscan
IPR047325
all species →		DomainCyclic nucleotide phosphodiesterase, catalytic domainInterproscan
IPR009097
all species →		Homologous_superfamilyCyclic phosphodiesteraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10156
all species →		2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004113
all species →		Molecular Function2',3'-cyclic-nucleotide 3'-phosphodiesterase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0009214
all species →		Biological Processcyclic nucleotide catabolic processInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_029679-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_029679-T1 global co-expression network
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