Detailed information of OS493_029692-T1 in Lophelia pertusa

Genomic Location: scaffold_183:184502...192304
NR annotation: KAJ7377333.1, hypothetical protein OS493_029692 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q92621Nuclear pore complex protein Nup205 OS=Homo sapiens OX=9606 GN=NUP205 PE=1 SV=3
Q8IQV9Nuclear pore complex protein Nup205 OS=Drosophila melanogaster OX=7227 GN=Nup205 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003440 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11894
all species →		Nup192Nuclear pore complex scaffold, nucleoporins 186/192/205RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021827
all species →		FamilyNucleoporin Nup186/Nup192/Nup205Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31344
all species →		NUCLEAR PORE COMPLEX PROTEIN NUP205Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005643
all species →		Cellular Componentnuclear poreInterproscan
GO:0006999
all species →		Biological Processnuclear pore organizationInterproscan
GO:0017056
all species →		Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0044611
all species →		Cellular Componentnuclear pore inner ringInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23741MAN1B, MNS3; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidaseEC:3.2.1.209
Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_029692-T1 global co-expression network
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