Detailed information of OS493_029697-T1 in Lophelia pertusa

Genomic Location: scaffold_183:242448...252510
NR annotation: KAJ7377338.1, hypothetical protein OS493_029697 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P22758Protein-glutamine gamma-glutamyltransferase K OS=Oryctolagus cuniculus OX=9986 GN=TGM1 PE=2 SV=2
P22735Protein-glutamine gamma-glutamyltransferase K OS=Homo sapiens OX=9606 GN=TGM1 PE=1 SV=4
P23606Protein-glutamine gamma-glutamyltransferase K OS=Rattus norvegicus OX=10116 GN=Tgm1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000881 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01841
all species →		Transglut_coreTransglutaminase-like superfamilyFamilyInterproscan
PF00927
all species →		Transglut_CTransglutaminase family, C-terminal ig like domainDomainInterproscan
PF00868
all species →		Transglut_NTransglutaminase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002931
all species →		DomainTransglutaminase-likeInterproscan
IPR036238
all species →		Homologous_superfamilyTransglutaminase, C-terminal domain superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR023608
all species →		FamilyProtein-glutamine gamma-glutamyltransferase, animalInterproscan
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR008958
all species →		DomainTransglutaminase, C-terminalInterproscan
IPR001102
all species →		DomainTransglutaminase, N-terminalInterproscan
IPR050779
all species →		FamilyProtein-glutamine gamma-glutamyltransferasesInterproscan
IPR036985
all species →		Homologous_superfamilyTransglutaminase-like superfamilyInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11590
all species →		PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003810
all species →		Molecular Functionprotein-glutamine gamma-glutamyltransferase activityInterproscan
GO:0018149
all species →		Biological Processpeptide cross-linkingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_029697-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_029697-T1 global co-expression network
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