Detailed information of OS493_029824-T1 in Lophelia pertusa

Genomic Location: scaffold_185:196665...197500
NR annotation: KAJ7354818.1, DIS3-like exonuclease 2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007567 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_029824-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR050180
all species →		FamilyRNR RibonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355
all species →		RIBONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000175
all species →		Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0006402
all species →		Biological ProcessmRNA catabolic processInterproscan
GO:0010587
all species →		Biological ProcessmiRNA catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_029824-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_029824-T1 global co-expression network
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