Detailed information of OS493_029908-T1 in Lophelia pertusa

Genomic Location: scaffold_186:539968...547301
NR annotation: KAJ7325359.1, hypothetical protein OS493_029908 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009440 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18345
all species →		zf_CCCH_4Zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045072
all species →		FamilyMKRN-likeInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11224
all species →		MAKORIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_029908-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_029908-T1 global co-expression network
TOP