Detailed information of OS493_029920-T1 in Lophelia pertusa

Genomic Location: scaffold_186:630633...638225
NR annotation: KAJ7325369.1, hypothetical protein OS493_029920 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DG81Plastin-3 OS=Danio rerio OX=7955 GN=pls3 PE=2 SV=1
A7E3Q8Plastin-3 OS=Bos taurus OX=9913 GN=PLS3 PE=2 SV=1
P13797Plastin-3 OS=Homo sapiens OX=9606 GN=PLS3 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001622 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →		CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR001589
all species →		Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR039959
all species →		FamilyFimbrin/PlastinInterproscan
IPR001715
all species →		DomainCalponin homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19961
all species →		FIMBRIN/PLASTINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005884
all species →		Cellular Componentactin filamentInterproscan
GO:0032432
all species →		Cellular Componentactin filament bundleInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →		Biological Processactin filament bundle assemblyInterproscan
GO:0051639
all species →		Biological Processactin filament network formationInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_029920-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_029920-T1 global co-expression network
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