Detailed information of OS493_030109-T1 in Lophelia pertusa

Genomic Location: scaffold_189:592574...606321
NR annotation: KAJ7377297.1, hypothetical protein OS493_030109 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZLG0Acetoacetyl-CoA synthetase OS=Gallus gallus OX=9031 GN=AACS PE=2 SV=1
Q9D2R0Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1
Q86V21Acetoacetyl-CoA synthetase OS=Homo sapiens OX=9606 GN=AACS PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003979 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan
PF16177
all species →		ACAS_NAcetyl-coenzyme A synthetase N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020845
all species →		Conserved_siteAMP-binding, conserved siteInterproscan
IPR045851
all species →		Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR042099
all species →		Homologous_superfamilyANL, N-terminal domainInterproscan
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan
IPR032387
all species →		DomainAcetyl-coenzyme A synthetase, N-terminal domainInterproscan
IPR005914
all species →		FamilyAcetoacetyl-CoA synthaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42921
all species →		ACETOACETYL-COA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030729
all species →		Molecular Functionacetoacetate-CoA ligase activityInterproscan
GO:0006629
all species →		Biological Processlipid metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01907AACS, acsA; acetoacetyl-CoA synthetaseEC:6.2.1.16
Lipid biosynthesis proteinsko01004deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030109-T1 global co-expression network
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