Detailed information of OS493_030252-T1 in Lophelia pertusa

Genomic Location: scaffold_192:731953...738214
NR annotation: KAJ7324078.1, Protein O-mannosyl-transferase tmtc4, partial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BG19Protein O-mannosyl-transferase TMTC4 OS=Mus musculus OX=10090 GN=Tmtc4 PE=2 SV=1
Q5T4D3Protein O-mannosyl-transferase TMTC4 OS=Homo sapiens OX=9606 GN=TMTC4 PE=1 SV=2
Q8BRH0Protein O-mannosyl-transferase TMTC3 OS=Mus musculus OX=10090 GN=Tmtc3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000850 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_030252-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR052346
all species →		FamilyProtein O-mannosyl-transferase TMTCInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44227
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000030
all species →		Molecular Functionmannosyltransferase activityInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0030968
all species →		Biological Processendoplasmic reticulum unfolded protein responseInterproscan
GO:0035269
all species →		Biological Processprotein O-linked mannosylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05956RABGGTB; geranylgeranyl transferase type-2 subunit betaEC:2.5.1.60
Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030252-T1 global co-expression network
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