Detailed information of OS493_030260-T1 in Lophelia pertusa

Genomic Location: scaffold_193:47199...48220
NR annotation: KAJ7389576.1, hypothetical protein OS493_030260 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JKF1Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2
P46940Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens OX=9606 GN=IQGAP1 PE=1 SV=1
Q13576Ras GTPase-activating-like protein IQGAP2 OS=Homo sapiens OX=9606 GN=IQGAP2 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002348 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_030260-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR008936
all species →		Homologous_superfamilyRho GTPase activation proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14149
all species →		RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIFInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005096
all species →		Molecular FunctionGTPase activator activityInterproscan
GO:0005516
all species →		Molecular Functioncalmodulin bindingInterproscan
GO:0005938
all species →		Cellular Componentcell cortexInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:1903479
all species →		Biological Processmitotic actomyosin contractile ring assembly actin filament organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030260-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030260-T1 global co-expression network
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