Detailed information of OS493_030523-T1 in Lophelia pertusa

Genomic Location: scaffold_197:336719...346950
NR annotation: KAJ7354746.1, hypothetical protein OS493_030523 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0R4ITC5Transformation/transcription domain-associated protein OS=Danio rerio OX=7955 GN=trrap PE=3 SV=1
Q9Y4A5Transformation/transcription domain-associated protein OS=Homo sapiens OX=9606 GN=TRRAP PE=1 SV=3
Q80YV3Transformation/transcription domain-associated protein OS=Mus musculus OX=10090 GN=Trrap PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001665 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20206
all species →		Tra1_ringTra1 HEAT repeat ring regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046805
all species →		RepeatTra1, HEAT repeat ring regionInterproscan
IPR050517
all species →		FamilyDNA Damage Response and Repair KinaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11139
all species →		ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000124
all species →		Cellular ComponentSAGA complexInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0035267
all species →		Cellular ComponentNuA4 histone acetyltransferase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030523-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030523-T1 global co-expression network
TOP