Detailed information of OS493_030544-T1 in Lophelia pertusa

Genomic Location: scaffold_197:514775...527654
NR annotation: KAJ7354767.1, Carbonyl reductase [NADPH] 3 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P47727Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2
P48758Carbonyl reductase [NADPH] 1 OS=Mus musculus OX=10090 GN=Cbr1 PE=1 SV=3
Q3SZD7Carbonyl reductase [NADPH] 1 OS=Bos taurus OX=9913 GN=CBR1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001288 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →		adh_shortshort chain dehydrogenaseDomainInterproscan
PF15294
all species →		Leu_zipLeucine zipperFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR026157
all species →		FamilyLeucine zipper transcription factor-like protein 1Interproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR020904
all species →		Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43963
all species →		CARBONYL REDUCTASE 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030544-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030544-T1 global co-expression network
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