Gene detail

Detailed information of OS493_030609-T1 in Lophelia pertusa

Genomic Location: scaffold_199:414510...417015
NR annotation: KAJ7389561.1, phosphoglycerate kinase [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P41759	Phosphoglycerate kinase OS=Schistosoma mansoni OX=6183 GN=PGK PE=1 SV=1
Q01604	Phosphoglycerate kinase OS=Drosophila melanogaster OX=7227 GN=Pgk PE=1 SV=2
P91427	Probable phosphoglycerate kinase OS=Caenorhabditis elegans OX=6239 GN=pgk-1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002908 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00162 all species →	PGK	Phosphoglycerate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015824 all species →	Homologous_superfamily	Phosphoglycerate kinase, N-terminal	Interproscan
IPR036043 all species →	Homologous_superfamily	Phosphoglycerate kinase superfamily	Interproscan
IPR001576 all species →	Family	Phosphoglycerate kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11406 all species →	PHOSPHOGLYCERATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004618 all species →	Molecular Function	phosphoglycerate kinase activity	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006094 all species →	Biological Process	gluconeogenesis	Interproscan
GO:0043531 all species →	Molecular Function	ADP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_030609-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_030609-T1 global co-expression network