Detailed information of OS493_030649-T1 in Lophelia pertusa

Genomic Location: scaffold_200:585186...591939
NR annotation: KAJ7383118.1, hypothetical protein OS493_030649 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008521 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02201
all species →		SWIBSWIB/MDM2 domainDomainInterproscan
PF08766
all species →		DEK_CDEK C terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003121
all species →		DomainSWIB/MDM2 domainInterproscan
IPR036885
all species →		Homologous_superfamilySWIB/MDM2 domain superfamilyInterproscan
IPR014876
all species →		DomainDEK, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13844
all species →		SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030649-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030649-T1 global co-expression network
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