Detailed information of OS493_030660-T1 in Lophelia pertusa

Genomic Location: scaffold_200:684307...686872
NR annotation: KAJ7383127.1, histone H3 acetylation [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15542Transcription initiation factor TFIID subunit 5 OS=Homo sapiens OX=9606 GN=TAF5 PE=1 SV=3
Q8C092Transcription initiation factor TFIID subunit 5 OS=Mus musculus OX=10090 GN=Taf5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001573 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04494
all species →		TFIID_NTD2WD40 associated region in TFIID subunit, NTD2 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007582
all species →		DomainTFIID subunit TAF5, NTD2 domainInterproscan
IPR037264
all species →		Homologous_superfamilyTFIID subunit TAF5, NTD2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19879
all species →		TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005669
all species →		Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251
all species →		Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030660-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030660-T1 global co-expression network
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