Detailed information of OS493_030665-T1 in Lophelia pertusa

Genomic Location: scaffold_200:703756...705673
NR annotation: KAJ7383132.1, zinc-finger protein [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006589 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13894
all species →		zf-C2H2_4C2H2-type zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050752
all species →		FamilyC2H2-type zinc-finger domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24384
all species →		FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030665-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030665-T1 global co-expression network
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