Detailed information of OS493_030680-T1 in Lophelia pertusa

Genomic Location: scaffold_201:101811...105747
NR annotation: KAJ7377086.1, Cytoskeleton-associated protein 2 C-terminus [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A5PK21Cytoskeleton-associated protein 2-like OS=Bos taurus OX=9913 GN=CKAP2L PE=2 SV=1
Q7TS74Cytoskeleton-associated protein 2-like OS=Mus musculus OX=10090 GN=Ckap2l PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008145 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15297
all species →		CKAP2_CCytoskeleton-associated protein 2 C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052855
all species →		FamilyCytoskeleton-associated protein 2-likeInterproscan
IPR029197
all species →		DomainCytoskeleton-associated protein 2, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47078
all species →		CYTOSKELETON-ASSOCIATED PROTEIN 2-LIKEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005813
all species →		Cellular ComponentcentrosomeInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0072686
all species →		Cellular Componentmitotic spindleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030680-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030680-T1 global co-expression network
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