Detailed information of OS493_030688-T1 in Lophelia pertusa

Genomic Location: scaffold_201:150490...152916
NR annotation: KAJ7377094.1, sorting nexin 25 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H3E2Sorting nexin-25 OS=Homo sapiens OX=9606 GN=SNX25 PE=1 SV=2
Q3ZT31Sorting nexin-25 OS=Mus musculus OX=10090 GN=Snx25 PE=1 SV=3
Q8BHY8Sorting nexin-14 OS=Mus musculus OX=10090 GN=Snx14 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003630 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02194
all species →		PXAPXA domainFamilyInterproscan
PF00615
all species →		RGSRegulator of G protein signaling domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003114
all species →		DomainPhox-associated domainInterproscan
IPR044926
all species →		Homologous_superfamilyRGS, subdomain 2Interproscan
IPR036305
all species →		Homologous_superfamilyRGS domain superfamilyInterproscan
IPR016137
all species →		DomainRGS domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22775
all species →		SORTING NEXINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0035091
all species →		Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030688-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030688-T1 global co-expression network
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