Detailed information of OS493_030694-T1 in Lophelia pertusa

Genomic Location: scaffold_201:211527...218363
NR annotation: KAJ7377100.1, hypothetical protein OS493_030694 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9FIV6Protease Do-like 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DEGP10 PE=2 SV=1
Q9FL12Protease Do-like 9 OS=Arabidopsis thaliana OX=3702 GN=DEGP9 PE=1 SV=1
Q9SHZ0Protease Do-like 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DEGP4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007504 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17815
all species →		PDZ_3PDZ domainDomainInterproscan
PF13365
all species →		Trypsin_2Trypsin-like peptidase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046449
all species →		Homologous_superfamilyProtease Do-like, PDZ domain superfamilyInterproscan
IPR043504
all species →		Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR001940
all species →		FamilyPeptidase S1CInterproscan
IPR041517
all species →		DomainProtease Do-like, PDZ domainInterproscan
IPR009003
all species →		Homologous_superfamilyPeptidase S1, PA clanInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45980
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0004252
all species →		Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030694-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030694-T1 global co-expression network
TOP