Detailed information of OS493_030696-T1 in Lophelia pertusa

Genomic Location: scaffold_201:232175...235068
NR annotation: KAJ7377102.1, hypothetical protein OS493_030696 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
E9QI36Histidine--tRNA ligase OS=Danio rerio OX=7955 GN=hars PE=3 SV=2
Q2KI84Histidine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=HARS1 PE=2 SV=1
Q61035Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002441 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13393
all species →		tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR041715
all species →		DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11476
all species →		HISTIDYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0004821
all species →		Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006427
all species →		Biological Processhistidyl-tRNA aminoacylationInterproscan
GO:0032543
all species →		Biological Processmitochondrial translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030696-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030696-T1 global co-expression network
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