Detailed information of OS493_030900-T1 in Lophelia pertusa

Genomic Location: scaffold_205:320615...324692
NR annotation: KAJ7389515.1, Swi SNF matrix associated, actin dependent regulator of chromatin [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NZP1DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus OX=10090 GN=Zranb3 PE=1 SV=1
Q5FWF4DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens OX=9606 GN=ZRANB3 PE=1 SV=2
E1BB03DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus OX=9913 GN=ZRANB3 PE=3 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001424 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176
all species →		SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038718
all species →		Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000330
all species →		DomainSNF2, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45766
all species →		DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0031297
all species →		Biological Processreplication fork processingInterproscan
GO:0048478
all species →		Biological Processobsolete replication fork protectionInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0140658
all species →		Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_030900-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_030900-T1 global co-expression network
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