Detailed information of OS493_031063-T1 in Lophelia pertusa

Genomic Location: scaffold_209:6995...12418
NR annotation: KAJ7353926.1, 26S proteasome non-ATPase regulatory subunit 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3TXS726S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1
Q5F41826S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus OX=9031 GN=PSMD1 PE=2 SV=1
Q9946026S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens OX=9606 GN=PSMD1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004541 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18004
all species →		RPN2_C26S proteasome regulatory subunit RPN2 C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042235
all species →		Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR040623
all species →		Domain26S proteasome regulatory subunit RPN2, C-terminalInterproscan

 PANTHER
No PANTHER signature was detected for OS493_031063-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for OS493_031063-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_031063-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_031063-T1 global co-expression network
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