Detailed information of OS493_031070-T1 in Lophelia pertusa

Genomic Location: scaffold_209:110617...152498
NR annotation: KAJ7353930.1, Mediator of RNA polymerase II transcription subunit 12-like protein [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q86YW9Mediator of RNA polymerase II transcription subunit 12-like protein OS=Homo sapiens OX=9606 GN=MED12L PE=1 SV=2
Q8BQM9Mediator of RNA polymerase II transcription subunit 12-like protein OS=Mus musculus OX=10090 GN=Med12l PE=1 SV=2
Q2QCI8Mediator of RNA polymerase II transcription subunit 12 OS=Danio rerio OX=7955 GN=med12 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002105 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09497
all species →		Med12Transcription mediator complex subunit Med12DomainInterproscan
PF12145
all species →		Med12-LCEWAVEukaryotic Mediator 12 subunit domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019035
all species →		DomainMediator complex, subunit Med12Interproscan
IPR051647
all species →		FamilyMediator complex subunit 12Interproscan
IPR021990
all species →		DomainMediator complex, subunit Med12, LCEWAV-domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46007
all species →		MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016592
all species →		Cellular Componentmediator complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_031070-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_031070-T1 global co-expression network
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