Detailed information of OS493_031114-T1 in Lophelia pertusa

Genomic Location: scaffold_210:83019...85648
NR annotation: KAJ7323701.1, Lysine-specific demethylase 6A [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O14607Histone demethylase UTY OS=Homo sapiens OX=9606 GN=UTY PE=1 SV=2
O15550Lysine-specific demethylase 6A OS=Homo sapiens OX=9606 GN=KDM6A PE=1 SV=2
O70546Lysine-specific demethylase 6A OS=Mus musculus OX=10090 GN=Kdm6a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003601 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21326
all species →		KDM6_GATALKDM6, GATA-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051630
all species →		FamilyTranscriptional Corepressor and Histone DemethylaseInterproscan
IPR046941
all species →		Homologous_superfamilyLysine-specific demethylase 6, GATA-like domain superfamilyInterproscan
IPR048560
all species →		DomainLysine-specific demethylase 6A/B-like, GATA-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14017
all species →		LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0010468
all species →		Biological Processregulation of gene expressionInterproscan
GO:0031490
all species →		Molecular Functionchromatin DNA bindingInterproscan
GO:0044666
all species →		Cellular ComponentMLL3/4 complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_031114-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_031114-T1 global co-expression network
TOP