Detailed information of OS493_031867-T1 in Lophelia pertusa

Genomic Location: scaffold_228:195746...211756
NR annotation: KAJ7323392.1, Sorting nexin-19 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006092 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787
all species →		PXPX domainDomainInterproscan
PF08628
all species →		Nexin_CSorting nexin C terminalFamilyInterproscan
PF02194
all species →		PXAPXA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003114
all species →		DomainPhox-associated domainInterproscan
IPR001683
all species →		DomainPhox homologyInterproscan
IPR013937
all species →		DomainSorting nexin, C-terminalInterproscan
IPR036871
all species →		Homologous_superfamilyPX domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22775
all species →		SORTING NEXINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0035091
all species →		Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_031867-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_031867-T1 global co-expression network
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