Detailed information of OS493_031887-T1 in Lophelia pertusa

Genomic Location: scaffold_228:503360...508272
NR annotation: KAJ7323412.1, Stromal cell-derived factor 2-like protein [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99470Stromal cell-derived factor 2 OS=Homo sapiens OX=9606 GN=SDF2 PE=1 SV=2
Q9DCT5Stromal cell-derived factor 2 OS=Mus musculus OX=10090 GN=Sdf2 PE=1 SV=1
Q3SZ45Stromal cell-derived factor 2 OS=Bos taurus OX=9913 GN=SDF2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007345 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02815
all species →		MIRMIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016093
all species →		DomainMIR motifInterproscan
IPR036300
all species →		Homologous_superfamilyMir domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46809
all species →		STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_031887-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_031887-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_031887-T1 global co-expression network
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