Detailed information of OS493_032003-T1 in Lophelia pertusa

Genomic Location: scaffold_231:223281...227947
NR annotation: KAJ7376855.1, hypothetical protein OS493_032003 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8CIH9Amidophosphoribosyltransferase OS=Mus musculus OX=10090 GN=Ppat PE=1 SV=1
P35433Amidophosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Ppat PE=1 SV=1
P28173Amidophosphoribosyltransferase OS=Gallus gallus OX=9031 GN=PPAT PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006531 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13522
all species →		GATase_6Glutamine amidotransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017932
all species →		DomainGlutamine amidotransferase type 2 domainInterproscan
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR005854
all species →		FamilyAmidophosphoribosyltransferaseInterproscan
IPR035584
all species →		DomainAmidophosphoribosyltransferase, N-terminalInterproscan
IPR029057
all species →		Homologous_superfamilyPhosphoribosyltransferase-likeInterproscan
IPR000836
all species →		DomainPhosphoribosyltransferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11907
all species →		AMIDOPHOSPHORIBOSYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004044
all species →		Molecular Functionamidophosphoribosyltransferase activityInterproscan
GO:0009113
all species →		Biological Processpurine nucleobase biosynthetic processInterproscan
GO:0006164
all species →		Biological Processpurine nucleotide biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01464DPYS, dht, hydA; dihydropyrimidinaseEC:3.5.2.2
Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_032003-T1 global co-expression network
TOP