Detailed information of OS493_032005-T1 in Lophelia pertusa

Genomic Location: scaffold_231:233576...246165
NR annotation: KAJ7376857.1, hypothetical protein OS493_032005 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A1U8QWA2Glycine betaine reductase ATRR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ATRR PE=1 SV=1
Q70LM4Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1
O30408Tyrocidine synthase 2 OS=Brevibacillus parabrevis OX=54914 GN=tycB PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002098 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan
PF07993
all species →		NAD_binding_4Male sterility proteinFamilyInterproscan
PF00550
all species →		PP-bindingPhosphopantetheine attachment siteDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009081
all species →		DomainPhosphopantetheine binding ACP domainInterproscan
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan
IPR045851
all species →		Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR042099
all species →		Homologous_superfamilyANL, N-terminal domainInterproscan
IPR036736
all species →		Homologous_superfamilyACP-like superfamilyInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR013120
all species →		DomainFatty acyl-coenzyme A reductase, NAD-binding domainInterproscan
IPR006162
all species →		PTMPhosphopantetheine attachment siteInterproscan
IPR020806
all species →		DomainPolyketide synthase, phosphopantetheine-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44845
all species →		CARRIER DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0031177
all species →		Molecular Functionphosphopantetheine bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_032005-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_032005-T1 global co-expression network
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