Detailed information of OS493_032179-T1 in Lophelia pertusa

Genomic Location: scaffold_235:203927...225923
NR annotation: KAJ7389324.1, hypothetical protein OS493_032179 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q90243Vitellogenin (Fragment) OS=Acipenser transmontanus OX=7904 PE=2 SV=1
Q91062Vitellogenin OS=Ichthyomyzon unicuspis OX=30308 PE=1 SV=1
P02845Vitellogenin-2 OS=Gallus gallus OX=9031 GN=VTG2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001514 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08742
all species →
C8C8 domainDomainInterproscan
PF01347
all species →
Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF00094
all species →
VWDvon Willebrand factor type D domainDomainInterproscan
PF06448
all species →
DUF1081Domain of Unknown Function (DUF1081)FamilyInterproscan
PF09172
all species →
Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014853
all species →
DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR001747
all species →
DomainVitellogenin, N-terminalInterproscan
IPR011030
all species →
Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR015816
all species →
Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan
IPR050733
all species →
FamilyVitellogenin/ApolipophorinInterproscan
IPR001846
all species →
Domainvon Willebrand factor, type D domainInterproscan
IPR015819
all species →
Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR015255
all species →
DomainVitellinogen, open beta-sheetInterproscan
IPR009454
all species →
DomainLipid transport, open beta-sheetInterproscan
IPR015817
all species →
Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23345
all species →
VITELLOGENIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005319
all species →
Molecular Functionlipid transporter activityInterproscan
GO:0006869
all species →
Biological Processlipid transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_032179-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_032179-T1 global co-expression network
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