Detailed information of OS493_032441-T1 in Lophelia pertusa

Genomic Location: scaffold_241:296359...297243
NR annotation: KAJ7389284.1, hypothetical protein OS493_032441 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011950 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00447
all species →		HSF_DNA-bindHSF-type DNA-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000232
all species →		DomainHeat shock factor (HSF)-type, DNA-bindingInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for OS493_032441-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_032441-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_032441-T1 global co-expression network
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