Detailed information of OS493_032824-T1 in Lophelia pertusa

Genomic Location: scaffold_249:547760...556252
NR annotation: KAJ7376763.1, hypothetical protein OS493_032824 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4VC33E3 ubiquitin-protein transferase MAEA OS=Mus musculus OX=10090 GN=Maea PE=1 SV=1
Q5RKJ1E3 ubiquitin-protein transferase MAEA OS=Rattus norvegicus OX=10116 GN=Maea PE=2 SV=2
Q7L5Y9E3 ubiquitin-protein transferase MAEA OS=Homo sapiens OX=9606 GN=MAEA PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007028 (this species only)
Ubiquitin familyE3|E3 activity RING|U-box · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10607
all species →		CTLHCTLH/CRA C-terminal to LisH motif domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan
IPR006595
all species →		DomainCTLH, C-terminal LisH motifInterproscan
IPR044063
all species →		DomainGid-type RING finger domainInterproscan
IPR024964
all species →		DomainCTLH/CRA C-terminal to LisH motif domainInterproscan
IPR013144
all species →		DomainCRA domainInterproscan
IPR045098
all species →		FamilyFyv10 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12170
all species →		MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0034657
all species →		Cellular ComponentGID complexInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18624MAEA, EMP; macrophage erythroblast attacher-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_032824-T1 global co-expression network
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