Detailed information of OS493_033002-T1 in Lophelia pertusa

Genomic Location: scaffold_253:346808...356050
NR annotation: KAJ7389198.1, DIS3 mitotic control [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R5N8DIS3-like exonuclease 1 OS=Pongo abelii OX=9601 GN=DIS3L PE=2 SV=1
Q8TF46DIS3-like exonuclease 1 OS=Homo sapiens OX=9606 GN=DIS3L PE=1 SV=2
Q5U2P0DIS3-like exonuclease 1 OS=Rattus norvegicus OX=10116 GN=Dis3l PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001458 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17216
all species →		Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR033771
all species →		DomainRrp44-like cold shock domainInterproscan
IPR050180
all species →		FamilyRNR RibonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355
all species →		RIBONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000175
all species →		Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000177
all species →		Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0016075
all species →		Biological ProcessrRNA catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_033002-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_033002-T1 global co-expression network
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