Gene detail

Detailed information of OS493_033566-T1 in Lophelia pertusa

Genomic Location: scaffold_268:76249...78798
NR annotation: KAJ7370221.1, Caveolin-1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q07E02	Caveolin-1 OS=Ornithorhynchus anatinus OX=9258 GN=CAV1 PE=3 SV=1
Q2QL79	Caveolin-1 OS=Didelphis virginiana OX=9267 GN=CAV1 PE=3 SV=1
Q00PJ9	Caveolin-1 OS=Atelerix albiventris OX=9368 GN=CAV1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006043 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01146 all species →	Caveolin	Caveolin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001612 all species →	Family	Caveolin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10844 all species →	CAVEOLIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005901 all species →	Cellular Component	caveola	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan
GO:0070836 all species →	Biological Process	caveola assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06278	CAV1; caveolin 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_033566-T1 global co-expression network