Gene detail

Detailed information of OS493_033621-T1 in Lophelia pertusa

Genomic Location: scaffold_269:80737...82315
NR annotation: KAJ7352811.1, hypothetical protein OS493_033621 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6AYY8	Acetyl-coenzyme A transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc33a1 PE=2 SV=1
Q99J27	Acetyl-coenzyme A transporter 1 OS=Mus musculus OX=10090 GN=Slc33a1 PE=1 SV=1
O00400	Acetyl-coenzyme A transporter 1 OS=Homo sapiens OX=9606 GN=SLC33A1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005528 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13000 all species →	Acatn	Acetyl-coenzyme A transporter 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004752 all species →	Family	AmpG-like permease/Acetyl-coenzyme A transporter 1	Interproscan
IPR024371 all species →	Family	Acetyl-coenzyme A transporter 1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12778 all species →	SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0008521 all species →	Molecular Function	acetyl-CoA transmembrane transporter activity	Interproscan
GO:0035348 all species →	Biological Process	acetyl-CoA transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12068	traL; conjugal transfer pilus assembly protein TraL	-	Secretion system	ko02044	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_033621-T1 global co-expression network