Detailed information of OS493_033711-T1 in Lophelia pertusa

Genomic Location: scaffold_272:317068...329243
NR annotation: KAJ7382655.1, hypothetical protein OS493_033711 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5THJ4Intermembrane lipid transfer protein VPS13D OS=Homo sapiens OX=9606 GN=VPS13D PE=1 SV=2
Q9VU08Intermembrane lipid transfer protein Vps13D OS=Drosophila melanogaster OX=7227 GN=Vps13D PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001911 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06650
all species →		VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026847
all species →		FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR009543
all species →		DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006623
all species →		Biological Processprotein targeting to vacuoleInterproscan
GO:0007005
all species →		Biological Processmitochondrion organizationInterproscan
GO:0019898
all species →		Cellular Componentextrinsic component of membraneInterproscan
GO:0045053
all species →		Biological Processprotein retention in Golgi apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_033711-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_033711-T1 global co-expression network
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