Detailed information of OS493_033890-T1 in Lophelia pertusa

Genomic Location: scaffold_276:292113...293255
NR annotation: KAJ7321782.1, Terminal nucleotidyltransferase 5C [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5XIV0Terminal nucleotidyltransferase 5C OS=Rattus norvegicus OX=10116 GN=Tent5c PE=2 SV=1
Q7ZUP1Terminal nucleotidyltransferase 5C OS=Danio rerio OX=7955 GN=tent5c PE=2 SV=1
Q5VWP2Terminal nucleotidyltransferase 5C OS=Homo sapiens OX=9606 GN=TENT5C PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009157 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07984
all species →		NTP_transf_7Nucleotidyltransferase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012937
all species →		FamilyTerminal nucleotidyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12974
all species →		PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:1990817
all species →		Molecular Functionpoly(A) RNA polymerase activityInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0048255
all species →		Biological ProcessmRNA stabilizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_033890-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_033890-T1 global co-expression network
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