Detailed information of OS493_034032-T1 in Lophelia pertusa

Genomic Location: scaffold_279:502936...506503
NR annotation: KAJ7376575.1, hypothetical protein OS493_034032 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4L1J4Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Magi1 PE=1 SV=1
Q6RHR9Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Magi1 PE=1 SV=1
Q96QZ7Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 OS=Homo sapiens OX=9606 GN=MAGI1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003778 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595
all species →		PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478
all species →		DomainPDZ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10316
all species →		MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034032-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034032-T1 global co-expression network
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