Detailed information of OS493_034102-T1 in Lophelia pertusa

Genomic Location: scaffold_281:220389...221566
NR annotation: KAJ7352751.1, Hydroxysteroid dehydrogenase-like protein 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66KC4Hydroxysteroid dehydrogenase-like protein 2 OS=Xenopus tropicalis OX=8364 GN=hsdl2 PE=2 SV=1
Q6P5L8Hydroxysteroid dehydrogenase-like protein 2 OS=Danio rerio OX=7955 GN=hsdl2 PE=2 SV=1
Q6PAY8Hydroxysteroid dehydrogenase-like protein 2 OS=Xenopus laevis OX=8355 GN=hsdl2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002538 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02036
all species →		SCP2SCP-2 sterol transfer familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036527
all species →		Homologous_superfamilySCP2 sterol-binding domain superfamilyInterproscan
IPR051935
all species →		FamilyHydroxysteroid dehydrogenase-like protein 2Interproscan
IPR003033
all species →		DomainSCP2 sterol-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42808
all species →		HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034102-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034102-T1 global co-expression network
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