Gene detail

Detailed information of OS493_034200-T1 in Lophelia pertusa

Genomic Location: scaffold_284:334241...369514
NR annotation: KAJ7382564.1, Mitofusin-2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

OS493_034200-T1

ATGAGGAGTTCATCGGCTCAACTGAAGCGAGCGTTGTCCATGAAAGACGGTGAAATGAACGGTGTCAATGGCGAGTCCCCTCTGCACAATTTTGTGAAAGCCAAGCAGAAGATTAACTCGACTTTTGGTGAAATTGGGAAGTATCTCAAGGACTGTAATAGCTTTTTGTCTGATTGTAAAATAGCTGATGATAATAACGAAGACATCAAGAAATCCTATAGCGAGGTGTCAGGTTATTTAGCGCAGGTTTCAAGCATCTCGGAGGTGTTATCAAGAGATCAGATGAAAGTGGCTTTCTTTGGACGCACCAGCAATGGAAAAAGTACTGCTGTGAATGCCATGTTACAAGACAAGATCTTACCAATGGGAATTGGTCATACAACAAACTGTTTTCTGAGTGTGCATGGCTCTGATTTACCAGACCCTTATATTTTAGTTCCAGAGAGTAACGACAAAAAGAACGTCAAGTCTTTATCTCAACTGGCCAATGCTCTGTGTGATGAGAAGCTTGATCATAGTAGTCTTGTTCAAGTCTTCTGGCCAAAGTCAAGATGTAAAATGTTGTCAGAAGATGTTGTTCTAGTTGACAGTCCTGGTATAGATGTCAGCCCTGATCTTGATTTGTGGATTGACAAGCATTGCTTGGATGCTGACGTGTTTGTACTGGTTGCTAATGCCGAGTCGACACTTATGGTTACGGAAAAGAACTTCTTCCACAAAGTGAACCAGCGCCTTTCACGGCCAAACATCTTCATCTTGAACAACAGATGGGATGCATCTGCTTCAGAACCTGACACCATGGAGCTGGTTAAAAACCAGCACCTCAGTAGGAATATCAGTTTCCTTGTCGATGAGCTAAAGTGCGTGGACAAAGCTCAGGCAGAAGACAGAGTGTTTTTTGTCTCTGCCAAAGAGACTCTAATGACAAGAATGCAGAAACACCAAGGCATGCCTCAAGGAGGTGGTGCCATTCATGTTGAAGGATTTCCTGCTCGACAGCTGGAGTTTGAGAACTTTGAACATAAATTTGAGGAGTGTATTTCGAAGTCGGCCATCCAGACCAAGTTTGAATCTCATGCCGTCAGTGGATTGAAAATTGCTACCATGGTGAAGGTTCTTATGGAGCAGATAGTTGGCTGCGCATTTCAGCAAAGATCAAAACTTGAGAAAGCCAAGAAGGAGCAAGAAGACAGACTGGAATATGTGAAGGAACAGCTGGAGATCTGTAGTCATGACGCCAAGAGACAGATCAAGGAAATCACTTCTAAAGTGGAGGGACAGGTAACTGAAGCTATGACAGAAGAGATTGGTCGATTGGGATTATTAGTGAACGAGTTTGATCATCCCTTCCACCCTCATCCTGGTTTTCTTAAAACATACAAAAAGGAGTTGTACAGTCACCTGGAGAAAGGCCTGGGAAGGAATATGACAGCTCGTTGCTCCAATTCTCAAACTGTAGTCATTTGCGATGCACAAAAAGACATGACAGATCGTCTTCGGGGTCTTCTCCCGCCAGAATCACCTGAAGTATCTCTTGAACCTGGATCCTCAGCTCTGGATTTCCAAGCGAGCTACAAACTTGACGTACCAAGCCTGTGCACAGATTTCCGAGAAGACATTGAGTTTCGCTTCACTCTGGGCTGGCAGGCGATTTTGAGGAAGTTCTTGGCGCCTCATAATGCTGGTCTTGCCATTGCTTTGGGAGCTAACCTTCAAAGAAATGTCCAGAGCCTAGTGCCCACTCCCCAGTCATATTCTACAGAGGGGAGACCCGGGGCAAGTGCCCAGGCCAGTTCATCGCGTGACGTCATGAAACGTCACGATGGTGATGACGTCACTGTGGCTGTCATTCAGGGGTTGGCTTCGCTGACATCACGCACCGGCACACTGGTTGTCATTGTTGGGGGACTGATCTGGAAGACTGTAGGATGGAAGTTTATTGCCCTGTGTGGTGGTCTGTACAGTGGCGTGTATGTAATAGAGAGGTTACGTTGGACCAACAGCGCTAAAGAAAAAGCCTTCAAACGGCAGTTTGTAGAGTACGCCACTGAAAAGCTACAGTTAGTGGTCAGCTTTACAAGTGCGAACTGCAGTATACAAGTGCAACAAGAATTGACGTCTACCTTCGTGAAGCTCAAGTCACTTGTACAGAGAGCCAAGGAGACTCTGGAAGAAAACATAATCGACTTGTACAAAGAGATCACGAGACTTGAGAAGATTGAGAACGATGCTAAAATATTAAGGAACAAAGCAAGTTGGTTTGAAAGCGAGTTGTCTCAGTTTGTCACGGTGTTTGGTTTGGAAAAGAGACGAAAGAAACTGATCGCATCATTTGGTCATTTGGATCAGTTTTCAACCAAAATGAAAGATAATCAATTAAGGCAATATCGTCCAGTGTTGCTTACAATATGCATCCCGCCACTGGAAGTTCCCAACTGTTGGGATAAAAATTTCAAGTTCAATACAATCAAGCAAGGTCTCGACATCTCTCAGATACCAAAGAATATGGAGCAAGGGAAACAATTGATGTTCGTCGTTTTACTGGCGCTTGTTTGTGCCCTGTTACCTGTTAACGAGACAAGAAGTATTCCATCATCGAAGCACCACAAAATCAAGAAGAGGTCGCTATATGAGGAAACATGCCCGCCGCCATTCATCATCGAAATAACAGAACAGTGCAACGATTCGTGTTTTGATGACGACTACTGCGTTGGAAACCAAATGTGCTGTTTTGACGGTTGCTCGTATGTCTGCATGGACCCAGTTCCCTCTGAACCAGTTATTGACTGGATTGAAGACAGGAACAACAATTTCACAGAACTCTTTGGGGGTGGAGAACTAGAGGTGGTAACTCCTGTCATAGAAGAACTAGGATGCTATTATCATGGGATGACGATAAACGACGGAGAGAAGCTACTTCTTGACTGCAGAATATGCTCTTGCTTCAATGGTAACCTGATGTGTGATGTCGCAAATTGCAACAAAGAATATCAAGCCCGCCTCGCTTTAGAGCGCAGCGGCTCGGGATCTGGGGCTAACAACGACGACGACGACGATGATGATGATGATGATGAGGTTAAAGGCGAAGGGTCTGGGGACGACAATTGGTATCCAATCGGAGGCGTGGAACACAAAGAGGAATTCATTCCTTTCGAAGAATTCGAAAAGAAGGAATTCGAAAAGAAAGAAAACAGCGGCGTAGAAGCGAAAGGGATTTTTATCCCCTTCGACAAAGATAACAGCAATAAGCTGGAACAAAGCGGCGAGGAAGACAATACTGCAGACAGGGGAGAAAATTTTATTCCATTTGATGAAGAAACGAACAACGAACAGAGCGGTGACGAGGTCACTTCCTTTGCCAGAAGAAGACTTTAA

Transcript

OS493_034200-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O95140	Mitofusin-2 OS=Homo sapiens OX=9606 GN=MFN2 PE=1 SV=3
Q80U63	Mitofusin-2 OS=Mus musculus OX=10090 GN=Mfn2 PE=1 SV=3
Q8R500	Mitofusin-2 OS=Rattus norvegicus OX=10116 GN=Mfn2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003175 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00095 all species →	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan
PF04799 all species →	Fzo_mitofusin	fzo-like conserved region	Family	Interproscan
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008197 all species →	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR030381 all species →	Domain	Dynamin-type guanine nucleotide-binding (G) domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027094 all species →	Family	Mitofusin family	Interproscan
IPR036645 all species →	Homologous_superfamily	Elafin-like superfamily	Interproscan
IPR006884 all species →	Domain	Fzo/mitofusin HR2 domain	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10465 all species →	TRANSMEMBRANE GTPASE FZO1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0030414 all species →	Molecular Function	peptidase inhibitor activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005741 all species →	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0008053 all species →	Biological Process	mitochondrial fusion	Interproscan
GO:0031306 all species →	Cellular Component	obsolete intrinsic component of mitochondrial outer membrane	Interproscan
GO:0051646 all species →	Biological Process	mitochondrion localization	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_034200-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_034200-T1 global co-expression network