Detailed information of OS493_034228-T1 in Lophelia pertusa

Genomic Location: scaffold_285:99588...101569
NR annotation: KAJ7376492.1, Beta,beta-carotene 15,15'-monooxygenase [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91XT5Beta,beta-carotene 15,15'-dioxygenase OS=Rattus norvegicus OX=10116 GN=Bco1 PE=2 SV=1
Q9HAY6Beta,beta-carotene 15,15'-dioxygenase OS=Homo sapiens OX=9606 GN=BCO1 PE=1 SV=1
Q9JJS6Beta,beta-carotene 15,15'-dioxygenase OS=Mus musculus OX=10090 GN=Bco1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001128 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03055
all species →		RPE65Retinal pigment epithelial membrane proteinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004294
all species →		FamilyCarotenoid oxygenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10543
all species →		BETA-CAROTENE DIOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0010436
all species →		Molecular Functioncarotenoid dioxygenase activityInterproscan
GO:0016121
all species →		Biological Processcarotene catabolic processInterproscan
GO:0016702
all species →		Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034228-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034228-T1 global co-expression network
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