Detailed information of OS493_034335-T1 in Lophelia pertusa

Genomic Location: scaffold_287:454284...469521
NR annotation: KAJ7352727.1, hypothetical protein OS493_034335 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001094 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09848
all species →		SLFN-g3_helicaseSchlafen group 3, DNA/RNA helicase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018647
all species →		DomainSchlafen group 3-like, DNA/RNA helicase domainInterproscan
IPR045055
all species →		FamilyDNA2/NAM7-like helicaseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887
all species →		DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0031048
all species →		Biological Processregulatory ncRNA-mediated heterochromatin formationInterproscan
GO:0031380
all species →		Cellular Componentnuclear RNA-directed RNA polymerase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_034335-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_034335-T1 global co-expression network
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